Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Vps9d1Q8C190 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vps9d1Q8C190 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm6266-201ENSMUST00000203844 806 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm17794-201ENSMUST00000220252 955 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Vps9d1Q8C190 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Cog3-203ENSMUST00000227473 4197 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm5687-201ENSMUST00000118252 640 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm18062-201ENSMUST00000208020 547 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm18055-201ENSMUST00000208254 547 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm5356-201ENSMUST00000093326 615 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Vps9d1Q8C190 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms