Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm27243-201ENSMUST00000183964 521 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.88□□□□□ -0.35
Nup54Q8BTS4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm13350-201ENSMUST00000120519 479 ntBASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.87□□□□□ -0.35
Nup54Q8BTS4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nup54Q8BTS4 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nup54Q8BTS4 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Nup54Q8BTS4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms