Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Gm17812-201ENSMUST00000204935 318 ntBASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Scfd1Q8BRF7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Gm24749-201ENSMUST00000157838 343 ntBASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Mir6927-201ENSMUST00000184494 71 ntBASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scfd1Q8BRF7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.33□□□□□ -0.11
Scfd1Q8BRF7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scfd1Q8BRF7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Mir5120-201ENSMUST00000175020 78 ntBASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Gm28450-201ENSMUST00000187349 638 ntBASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Gm7003-201ENSMUST00000195089 312 ntBASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Gm18753-201ENSMUST00000201000 566 ntBASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scfd1Q8BRF7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scfd1Q8BRF7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms