Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ccdc40Q8BI79 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 AC131586.1-201ENSMUST00000228844 2964 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm11637-201ENSMUST00000120601 592 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm12291-201ENSMUST00000121627 311 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc40Q8BI79 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gm12203-201ENSMUST00000118235 598 ntBASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gm12209-201ENSMUST00000120089 596 ntBASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gm37497-201ENSMUST00000195830 798 ntBASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc40Q8BI79 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms