Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf38Q8BI21 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm13612-201ENSMUST00000119276 390 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf38Q8BI21 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Gm7653-201ENSMUST00000214567 508 ntBASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf38Q8BI21 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms