Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ubfd1Q78JW9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ubfd1Q78JW9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubfd1Q78JW9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ubfd1Q78JW9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubfd1Q78JW9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ubfd1Q78JW9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ubfd1Q78JW9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ubfd1Q78JW9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm14130-201ENSMUST00000118417 987 ntBASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm14832-201ENSMUST00000121289 322 ntBASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ubfd1Q78JW9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.25□□□□□ -0.45
Ubfd1Q78JW9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms