Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
CtifQ6PEE2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CtifQ6PEE2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CtifQ6PEE2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
CtifQ6PEE2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CtifQ6PEE2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
CtifQ6PEE2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.39□□□□□ -0.27
CtifQ6PEE2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.39□□□□□ -0.27
CtifQ6PEE2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.39□□□□□ -0.27
CtifQ6PEE2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.39□□□□□ -0.27
CtifQ6PEE2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CtifQ6PEE2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm12291-201ENSMUST00000121627 311 ntBASIC13.38□□□□□ -0.27
CtifQ6PEE2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm29608-201ENSMUST00000190444 463 ntBASIC13.38□□□□□ -0.27
CtifQ6PEE2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.38□□□□□ -0.27
CtifQ6PEE2 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.38□□□□□ -0.27
CtifQ6PEE2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CtifQ6PEE2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CtifQ6PEE2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms