Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm14760-201ENSMUST00000121831 999 ntBASIC13.1□□□□□ -0.31
Smarcd1Q61466 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm17376-201ENSMUST00000166016 84 ntBASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm28882-201ENSMUST00000185504 314 ntBASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm3096-201ENSMUST00000185770 364 ntBASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.1□□□□□ -0.31
Smarcd1Q61466 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcd1Q61466 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcd1Q61466 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm14832-201ENSMUST00000121289 322 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm27046-201ENSMUST00000182160 463 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm9022-201ENSMUST00000182482 992 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm18304-201ENSMUST00000189162 546 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm6082-201ENSMUST00000215204 454 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm8712-201ENSMUST00000221090 701 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.09□□□□□ -0.31
Smarcd1Q61466 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcd1Q61466 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.08□□□□□ -0.31
Smarcd1Q61466 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd1Q61466 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Smarcd1Q61466 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Gm24845-201ENSMUST00000158034 109 ntBASIC13.08□□□□□ -0.32
Smarcd1Q61466 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.08□□□□□ -0.32
Smarcd1Q61466 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.08□□□□□ -0.32
Smarcd1Q61466 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms