Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.28□□□□□ -0.44
Vsx2Q61412 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vsx2Q61412 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vsx2Q61412 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.27□□□□□ -0.44
Vsx2Q61412 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vsx2Q61412 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.27□□□□□ -0.44
Vsx2Q61412 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vsx2Q61412 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.27□□□□□ -0.45
Vsx2Q61412 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.27□□□□□ -0.45
Vsx2Q61412 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.27□□□□□ -0.45
Vsx2Q61412 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Vsx2Q61412 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.27□□□□□ -0.45
Vsx2Q61412 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.27□□□□□ -0.45
Vsx2Q61412 Gm42693-201ENSMUST00000196779 631 ntBASIC12.27□□□□□ -0.45
Vsx2Q61412 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.27□□□□□ -0.45
Vsx2Q61412 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vsx2Q61412 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vsx2Q61412 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.27□□□□□ -0.45
Vsx2Q61412 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vsx2Q61412 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vsx2Q61412 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.26□□□□□ -0.45
Vsx2Q61412 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.26□□□□□ -0.45
Vsx2Q61412 Gm22018-201ENSMUST00000104357 131 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms