Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm18054-201ENSMUST00000207539 555 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
ClpbQ60649 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.1□□□□□ -0.47
ClpbQ60649 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.1□□□□□ -0.47
ClpbQ60649 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ClpbQ60649 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ClpbQ60649 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ClpbQ60649 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ClpbQ60649 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ClpbQ60649 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Gm12363-201ENSMUST00000122250 668 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.09□□□□□ -0.47
ClpbQ60649 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.09□□□□□ -0.47
ClpbQ60649 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.09□□□□□ -0.47
ClpbQ60649 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Gm19309-201ENSMUST00000218295 205 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ClpbQ60649 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ClpbQ60649 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.09□□□□□ -0.47
ClpbQ60649 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ClpbQ60649 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClpbQ60649 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClpbQ60649 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClpbQ60649 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ClpbQ60649 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.08□□□□□ -0.48
ClpbQ60649 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClpbQ60649 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ClpbQ60649 Gm22018-201ENSMUST00000104357 131 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 Gm13813-201ENSMUST00000120998 787 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.08□□□□□ -0.48
ClpbQ60649 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.08□□□□□ -0.48
ClpbQ60649 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Gm25261-201ENSMUST00000157416 134 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.08□□□□□ -0.48
ClpbQ60649 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 Gm43133-201ENSMUST00000197472 463 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.08□□□□□ -0.48
ClpbQ60649 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClpbQ60649 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ClpbQ60649 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.08□□□□□ -0.48
ClpbQ60649 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms