Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Prdm1Q60636 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Gm25214-201ENSMUST00000104573 129 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Prdm1Q60636 Gm11531-201ENSMUST00000117614 555 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 Gm14760-201ENSMUST00000121831 999 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 Gm9368-201ENSMUST00000219348 831 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.69□□□□□ -0.06
Prdm1Q60636 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Prdm1Q60636 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.69□□□□□ -0.06
Prdm1Q60636 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.69□□□□□ -0.06
Prdm1Q60636 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Prdm1Q60636 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm10434-201ENSMUST00000101158 471 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm24231-201ENSMUST00000104315 133 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm13342-201ENSMUST00000121055 207 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm9022-201ENSMUST00000182482 992 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm43179-201ENSMUST00000198797 275 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.68□□□□□ -0.06
Prdm1Q60636 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Prdm1Q60636 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Prdm1Q60636 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm12241-201ENSMUST00000118330 726 ntBASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm14723-201ENSMUST00000118686 215 ntBASIC14.67□□□□□ -0.06
Prdm1Q60636 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Prdm1Q60636 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Prdm1Q60636 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm45865-201ENSMUST00000211815 945 ntBASIC14.67□□□□□ -0.06
Prdm1Q60636 Gm5950-201ENSMUST00000213337 772 ntBASIC14.67□□□□□ -0.06
Prdm1Q60636 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms