Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim40Q3UWA4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Gm11524-201ENSMUST00000119349 807 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Gm11978-201ENSMUST00000122315 466 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Gm21854-201ENSMUST00000179901 471 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Gm26315-201ENSMUST00000083890 321 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Cog3-203ENSMUST00000227473 4197 ntBASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trim40Q3UWA4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm27838-201ENSMUST00000184829 128 ntBASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm19078-201ENSMUST00000206311 727 ntBASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm9797-201ENSMUST00000052902 613 ntBASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim40Q3UWA4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms