Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm4271-201ENSMUST00000174444 973 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm27331-201ENSMUST00000183705 60 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm19184-201ENSMUST00000196798 928 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm29705-201ENSMUST00000212598 474 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trappc13Q3TIR1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm24644-201ENSMUST00000157114 139 ntBASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trappc13Q3TIR1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Matn2-203ENSMUST00000226766 3252 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm15703-201ENSMUST00000120250 880 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm12490-201ENSMUST00000120255 560 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm16296-201ENSMUST00000159905 325 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm27847-201ENSMUST00000183711 107 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm27375-201ENSMUST00000183799 107 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trappc13Q3TIR1 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms