Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm10419-201ENSMUST00000100944 1671 ntTSL 2 BASIC12.56□□□□□ -0.4
Col9a1Q05722 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.56□□□□□ -0.4
Col9a1Q05722 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Gm42852-201ENSMUST00000202649 1379 ntBASIC12.56□□□□□ -0.4
Col9a1Q05722 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Col9a1Q05722 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm11956-201ENSMUST00000119525 512 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm22144-201ENSMUST00000157402 102 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm26957-201ENSMUST00000182645 977 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm42710-201ENSMUST00000200608 985 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm45594-201ENSMUST00000211717 241 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Col9a1Q05722 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm44509-201ENSMUST00000205400 1324 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm20121-201ENSMUST00000198547 1594 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Col9a1Q05722 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Col9a1Q05722 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 AC139754.2-201ENSMUST00000218037 1455 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col9a1Q05722 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms