Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Msx3P70354 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Gm11964-201ENSMUST00000120982 444 ntBASIC12.93□□□□□ -0.34
Msx3P70354 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.93□□□□□ -0.34
Msx3P70354 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.93□□□□□ -0.34
Msx3P70354 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Msx3P70354 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Msx3P70354 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.93□□□□□ -0.34
Msx3P70354 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.93□□□□□ -0.34
Msx3P70354 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.92□□□□□ -0.34
Msx3P70354 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Msx3P70354 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Msx3P70354 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Gm12390-201ENSMUST00000117897 397 ntBASIC12.92□□□□□ -0.34
Msx3P70354 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.92□□□□□ -0.34
Msx3P70354 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.92□□□□□ -0.34
Msx3P70354 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Msx3P70354 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Msx3P70354 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.92□□□□□ -0.34
Msx3P70354 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Msx3P70354 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Msx3P70354 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Msx3P70354 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Msx3P70354 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Msx3P70354 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.91□□□□□ -0.34
Msx3P70354 Gm8018-201ENSMUST00000173536 789 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Gm18584-201ENSMUST00000203098 964 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.91□□□□□ -0.34
Msx3P70354 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Msx3P70354 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Msx3P70354 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.91□□□□□ -0.34
Msx3P70354 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.91□□□□□ -0.34
Msx3P70354 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Msx3P70354 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms