Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Snord83b-201ENSMUST00000104546 94 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm15703-201ENSMUST00000120250 880 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm15806-201ENSMUST00000120696 955 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.89□□□□□ -0.19
Hmgb1P63158 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.89□□□□□ -0.19
Hmgb1P63158 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.89□□□□□ -0.19
Hmgb1P63158 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Hmgb1P63158 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.89□□□□□ -0.19
Hmgb1P63158 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hmgb1P63158 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Gm22331-201ENSMUST00000158066 136 ntBASIC13.88□□□□□ -0.19
Hmgb1P63158 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Gm8652-201ENSMUST00000181363 964 ntBASIC13.88□□□□□ -0.19
Hmgb1P63158 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.88□□□□□ -0.19
Hmgb1P63158 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.88□□□□□ -0.19
Hmgb1P63158 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.88□□□□□ -0.19
Hmgb1P63158 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Hmgb1P63158 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hmgb1P63158 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm14760-201ENSMUST00000121831 999 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm16296-201ENSMUST00000159905 325 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm27331-201ENSMUST00000183705 60 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm19163-201ENSMUST00000223313 780 ntBASIC13.87□□□□□ -0.19
Hmgb1P63158 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.87□□□□□ -0.19
Hmgb1P63158 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Hmgb1P63158 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Hmgb1P63158 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms