Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lim2P56563 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lim2P56563 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lim2P56563 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lim2P56563 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Lim2P56563 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lim2P56563 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lim2P56563 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Lim2P56563 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lim2P56563 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Lim2P56563 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.58□□□□□ -0.4
Lim2P56563 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.58□□□□□ -0.4
Lim2P56563 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Lim2P56563 Gm15198-201ENSMUST00000117283 177 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Gm13316-201ENSMUST00000140537 691 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.58□□□□□ -0.4
Lim2P56563 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Lim2P56563 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.58□□□□□ -0.4
Lim2P56563 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.58□□□□□ -0.4
Lim2P56563 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Gm26035-201ENSMUST00000083065 308 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Gm22058-201ENSMUST00000083393 310 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Lim2P56563 Daam2-202ENSMUST00000224595 1926 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.58□□□□□ -0.4
Lim2P56563 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lim2P56563 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.57□□□□□ -0.4
Lim2P56563 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.57□□□□□ -0.4
Lim2P56563 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Lim2P56563 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Lim2P56563 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.57□□□□□ -0.4
Lim2P56563 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Lim2P56563 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Mir8109-201ENSMUST00000184375 117 ntBASIC12.57□□□□□ -0.4
Lim2P56563 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Gm7046-201ENSMUST00000221351 977 ntBASIC12.57□□□□□ -0.4
Lim2P56563 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Lim2P56563 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Lim2P56563 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lim2P56563 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.56□□□□□ -0.4
Lim2P56563 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Lim2P56563 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Lim2P56563 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms