Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.85■□□□□ 0.13
Msh6P54276 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.85■□□□□ 0.13
Msh6P54276 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.85■□□□□ 0.13
Msh6P54276 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Msh6P54276 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Msh6P54276 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Msh6P54276 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.85■□□□□ 0.13
Msh6P54276 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC15.85■□□□□ 0.13
Msh6P54276 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.85■□□□□ 0.13
Msh6P54276 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC15.85■□□□□ 0.13
Msh6P54276 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC15.85■□□□□ 0.13
Msh6P54276 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.85■□□□□ 0.13
Msh6P54276 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.85■□□□□ 0.13
Msh6P54276 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.85■□□□□ 0.13
Msh6P54276 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Msh6P54276 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Msh6P54276 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.84■□□□□ 0.13
Msh6P54276 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Gm12165-201ENSMUST00000117047 342 ntBASIC15.84■□□□□ 0.13
Msh6P54276 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.84■□□□□ 0.13
Msh6P54276 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Msh6P54276 Gm28071-201ENSMUST00000190355 478 ntBASIC15.84■□□□□ 0.13
Msh6P54276 Gm45219-201ENSMUST00000205602 465 ntBASIC15.84■□□□□ 0.13
Msh6P54276 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.84■□□□□ 0.13
Msh6P54276 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.84■□□□□ 0.13
Msh6P54276 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Msh6P54276 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Msh6P54276 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.83■□□□□ 0.13
Msh6P54276 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Msh6P54276 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.83■□□□□ 0.12
Msh6P54276 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Msh6P54276 Mir680-2-201ENSMUST00000102163 110 ntBASIC15.83■□□□□ 0.12
Msh6P54276 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Msh6P54276 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Msh6P54276 Gm23251-201ENSMUST00000103773 110 ntBASIC15.83■□□□□ 0.12
Msh6P54276 Gm14058-201ENSMUST00000116082 735 ntBASIC15.83■□□□□ 0.12
Msh6P54276 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms