Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm6082-201ENSMUST00000215204 454 ntBASIC13.3□□□□□ -0.28
Shmt1P50431 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.3□□□□□ -0.28
Shmt1P50431 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shmt1P50431 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Shmt1P50431 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.3□□□□□ -0.28
Shmt1P50431 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Shmt1P50431 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shmt1P50431 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Shmt1P50431 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm12314-201ENSMUST00000118104 538 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm20482-202ENSMUST00000174729 825 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Gm29199-201ENSMUST00000187766 775 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm26035-201ENSMUST00000083065 308 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shmt1P50431 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shmt1P50431 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.29□□□□□ -0.28
Shmt1P50431 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Shmt1P50431 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm13570-201ENSMUST00000140763 309 ntBASIC13.28□□□□□ -0.28
Shmt1P50431 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.28□□□□□ -0.28
Shmt1P50431 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm24845-201ENSMUST00000158034 109 ntBASIC13.28□□□□□ -0.28
Shmt1P50431 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm42937-201ENSMUST00000197360 752 ntBASIC13.28□□□□□ -0.28
Shmt1P50431 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm8712-201ENSMUST00000221090 701 ntBASIC13.28□□□□□ -0.28
Shmt1P50431 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.28□□□□□ -0.28
Shmt1P50431 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Shmt1P50431 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Shmt1P50431 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.28□□□□□ -0.28
Shmt1P50431 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms