Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdx2P43241 Gm12208-201ENSMUST00000122004 163 ntBASIC11.93□□□□□ -0.5
Cdx2P43241 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdx2P43241 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.93□□□□□ -0.5
Cdx2P43241 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdx2P43241 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.93□□□□□ -0.5
Cdx2P43241 Gm17827-201ENSMUST00000211825 742 ntBASIC11.93□□□□□ -0.5
Cdx2P43241 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdx2P43241 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cdx2P43241 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cdx2P43241 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cdx2P43241 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cdx2P43241 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cdx2P43241 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cdx2P43241 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Cdx2P43241 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Gm23251-201ENSMUST00000103773 110 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Cdx2P43241 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Gm8566-201ENSMUST00000120174 465 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdx2P43241 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm9022-201ENSMUST00000182482 992 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Gm43962-201ENSMUST00000203898 190 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm21811-201ENSMUST00000096485 930 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdx2P43241 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.92□□□□□ -0.5
Cdx2P43241 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdx2P43241 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdx2P43241 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cdx2P43241 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Cdx2P43241 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdx2P43241 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdx2P43241 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms