Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.84□□□□□ -0.51
Sox6P40645 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.84□□□□□ -0.51
Sox6P40645 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox6P40645 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox6P40645 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox6P40645 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox6P40645 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox6P40645 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox6P40645 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Sox6P40645 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Sox6P40645 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox6P40645 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox6P40645 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.83□□□□□ -0.52
Sox6P40645 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox6P40645 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.83□□□□□ -0.52
Sox6P40645 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.83□□□□□ -0.52
Sox6P40645 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.83□□□□□ -0.52
Sox6P40645 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.83□□□□□ -0.52
Sox6P40645 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox6P40645 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Sox6P40645 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sox6P40645 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox6P40645 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.82□□□□□ -0.52
Sox6P40645 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Sox6P40645 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox6P40645 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Gm16202-201ENSMUST00000117532 544 ntBASIC11.82□□□□□ -0.52
Sox6P40645 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.82□□□□□ -0.52
Sox6P40645 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Sox6P40645 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox6P40645 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox6P40645 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Sox6P40645 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.82□□□□□ -0.52
Sox6P40645 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.82□□□□□ -0.52
Sox6P40645 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox6P40645 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox6P40645 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox6P40645 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox6P40645 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox6P40645 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms