Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.91□□□□□ -0.34
Cxcl12P40224 Gm15703-201ENSMUST00000120250 880 ntBASIC12.91□□□□□ -0.34
Cxcl12P40224 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC12.91□□□□□ -0.34
Cxcl12P40224 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.91□□□□□ -0.34
Cxcl12P40224 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.91□□□□□ -0.34
Cxcl12P40224 Gm5298-201ENSMUST00000201122 892 ntBASIC12.91□□□□□ -0.34
Cxcl12P40224 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.91□□□□□ -0.34
Cxcl12P40224 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cxcl12P40224 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cxcl12P40224 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.9□□□□□ -0.34
Cxcl12P40224 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm13600-201ENSMUST00000117949 744 ntBASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm23218-201ENSMUST00000158124 276 ntBASIC12.9□□□□□ -0.34
Cxcl12P40224 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm8343-201ENSMUST00000182705 994 ntBASIC12.9□□□□□ -0.34
Cxcl12P40224 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.9□□□□□ -0.34
Cxcl12P40224 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.9□□□□□ -0.34
Cxcl12P40224 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cxcl12P40224 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Cxcl12P40224 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.9□□□□□ -0.35
Cxcl12P40224 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Gm12899-201ENSMUST00000120565 551 ntBASIC12.89□□□□□ -0.35
Cxcl12P40224 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.89□□□□□ -0.35
Cxcl12P40224 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Gm22877-201ENSMUST00000175451 105 ntBASIC12.89□□□□□ -0.35
Cxcl12P40224 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cxcl12P40224 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cxcl12P40224 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms