Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
Chd1P40201 Mir744-201ENSMUST00000103261 100 ntBASIC18.42■□□□□ 0.54
Chd1P40201 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Chd1P40201 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC18.42■□□□□ 0.54
Chd1P40201 Gm17709-201ENSMUST00000174536 1096 ntBASIC18.42■□□□□ 0.54
Chd1P40201 Gm9162-201ENSMUST00000182081 991 ntBASIC18.42■□□□□ 0.54
Chd1P40201 Gm44882-201ENSMUST00000205702 802 ntBASIC18.42■□□□□ 0.54
Chd1P40201 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Chd1P40201 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC18.42■□□□□ 0.54
Chd1P40201 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Gm4978-201ENSMUST00000071565 801 ntBASIC18.42■□□□□ 0.54
Chd1P40201 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC18.42■□□□□ 0.54
Chd1P40201 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd1P40201 AC164702.1-201ENSMUST00000220135 2212 ntBASIC18.42■□□□□ 0.54
Chd1P40201 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC18.41■□□□□ 0.54
Chd1P40201 Mir432-201ENSMUST00000157230 75 ntBASIC18.41■□□□□ 0.54
Chd1P40201 Gm3329-201ENSMUST00000159873 556 ntBASIC18.41■□□□□ 0.54
Chd1P40201 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC18.41■□□□□ 0.54
Chd1P40201 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC18.41■□□□□ 0.54
Chd1P40201 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Chd1P40201 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC18.41■□□□□ 0.54
Chd1P40201 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd1P40201 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chd1P40201 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chd1P40201 Gm14993-201ENSMUST00000121180 164 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm16459-201ENSMUST00000121443 686 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chd1P40201 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC18.4■□□□□ 0.54
Chd1P40201 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Gm18210-201ENSMUST00000209001 1524 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chd1P40201 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.4■□□□□ 0.54
Chd1P40201 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chd1P40201 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
Chd1P40201 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Gm23400-201ENSMUST00000174994 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm26463-201ENSMUST00000175065 101 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm24332-201ENSMUST00000175102 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25959-201ENSMUST00000175112 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm22475-201ENSMUST00000175169 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm22903-201ENSMUST00000175193 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25070-201ENSMUST00000175237 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm24159-201ENSMUST00000175264 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25299-201ENSMUST00000175283 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm23798-201ENSMUST00000175560 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm23802-201ENSMUST00000175565 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25708-201ENSMUST00000177687 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm24370-201ENSMUST00000178007 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm23049-201ENSMUST00000178068 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm28019-201ENSMUST00000178138 101 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25571-201ENSMUST00000178322 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25355-201ENSMUST00000178456 101 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm24975-201ENSMUST00000178492 101 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm23189-201ENSMUST00000178954 102 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm25100-201ENSMUST00000179750 101 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm23064-201ENSMUST00000179866 101 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm8756-201ENSMUST00000183250 929 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm6450-201ENSMUST00000200896 574 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm6423-201ENSMUST00000204315 934 ntBASIC18.4■□□□□ 0.54
Chd1P40201 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC18.4■□□□□ 0.54
Chd1P40201 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC18.4■□□□□ 0.54
Chd1P40201 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Chd1P40201 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd1P40201 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.4■□□□□ 0.54
Chd1P40201 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chd1P40201 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Chd1P40201 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Chd1P40201 Gm18227-201ENSMUST00000211082 1468 ntBASIC18.39■□□□□ 0.54
Chd1P40201 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd1P40201 Gm11405-201ENSMUST00000118689 1556 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms