Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.76□□□□□ -0.53
Sod1P08228 Gm3332-201ENSMUST00000189337 928 ntBASIC11.76□□□□□ -0.53
Sod1P08228 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sod1P08228 Gm44126-201ENSMUST00000204831 514 ntBASIC11.76□□□□□ -0.53
Sod1P08228 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.76□□□□□ -0.53
Sod1P08228 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.76□□□□□ -0.53
Sod1P08228 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.76□□□□□ -0.53
Sod1P08228 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Gm26448-201ENSMUST00000082446 203 ntBASIC11.76□□□□□ -0.53
Sod1P08228 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sod1P08228 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Sod1P08228 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.76□□□□□ -0.53
Sod1P08228 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sod1P08228 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sod1P08228 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sod1P08228 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.75□□□□□ -0.53
Sod1P08228 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.75□□□□□ -0.53
Sod1P08228 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sod1P08228 Gm27530-201ENSMUST00000184096 98 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm5733-201ENSMUST00000190232 939 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.75□□□□□ -0.53
Sod1P08228 Gm43184-201ENSMUST00000197247 542 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.75□□□□□ -0.53
Sod1P08228 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.75□□□□□ -0.53
Sod1P08228 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.75□□□□□ -0.53
Sod1P08228 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm807-202ENSMUST00000224929 408 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm1821-202ENSMUST00000227415 750 ntBASIC11.75□□□□□ -0.53
Sod1P08228 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.75□□□□□ -0.53
Sod1P08228 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sod1P08228 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.75□□□□□ -0.53
Sod1P08228 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.75□□□□□ -0.53
Sod1P08228 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sod1P08228 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.74□□□□□ -0.53
Sod1P08228 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sod1P08228 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sod1P08228 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sod1P08228 Gm15131-201ENSMUST00000119124 595 ntBASIC11.74□□□□□ -0.53
Sod1P08228 Gm7722-201ENSMUST00000120646 741 ntBASIC11.74□□□□□ -0.53
Sod1P08228 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms