Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P06344 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.24□□□□□ -0.61
P06344 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.24□□□□□ -0.61
P06344 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.24□□□□□ -0.61
P06344 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.24□□□□□ -0.61
P06344 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.24□□□□□ -0.61
P06344 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
P06344 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
P06344 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
P06344 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.24□□□□□ -0.61
P06344 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.24□□□□□ -0.61
P06344 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P06344 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.24□□□□□ -0.61
P06344 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.24□□□□□ -0.61
P06344 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.24□□□□□ -0.61
P06344 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
P06344 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P06344 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
P06344 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.23□□□□□ -0.61
P06344 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P06344 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
P06344 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
P06344 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P06344 Gm11964-201ENSMUST00000120982 444 ntBASIC11.23□□□□□ -0.61
P06344 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.23□□□□□ -0.61
P06344 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.23□□□□□ -0.61
P06344 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
P06344 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P06344 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.22□□□□□ -0.61
P06344 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
P06344 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.22□□□□□ -0.61
P06344 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
P06344 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.22□□□□□ -0.61
P06344 Gm21769-201ENSMUST00000211922 111 ntBASIC11.22□□□□□ -0.61
P06344 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
P06344 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
P06344 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
P06344 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P06344 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.21□□□□□ -0.61
P06344 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.21□□□□□ -0.61
P06344 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.21□□□□□ -0.61
P06344 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
P06344 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
P06344 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.21□□□□□ -0.61
P06344 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
P06344 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms