Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.5□□□□□ -0.25
Chrna1P04756 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Chrna1P04756 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Chrna1P04756 Gm4909-201ENSMUST00000118749 794 ntBASIC13.5□□□□□ -0.25
Chrna1P04756 Gm12217-201ENSMUST00000118858 696 ntBASIC13.5□□□□□ -0.25
Chrna1P04756 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna1P04756 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.5□□□□□ -0.25
Chrna1P04756 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chrna1P04756 Gm32999-201ENSMUST00000192693 562 ntBASIC13.5□□□□□ -0.25
Chrna1P04756 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna1P04756 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.5□□□□□ -0.25
Chrna1P04756 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna1P04756 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.5□□□□□ -0.25
Chrna1P04756 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Chrna1P04756 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Chrna1P04756 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Chrna1P04756 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Gm7857-201ENSMUST00000117957 358 ntBASIC13.49□□□□□ -0.25
Chrna1P04756 Gm9083-201ENSMUST00000120423 819 ntBASIC13.49□□□□□ -0.25
Chrna1P04756 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Gm45598-202ENSMUST00000210719 986 ntBASIC13.49□□□□□ -0.25
Chrna1P04756 Gm8385-201ENSMUST00000058999 643 ntBASIC13.49□□□□□ -0.25
Chrna1P04756 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chrna1P04756 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Chrna1P04756 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chrna1P04756 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Chrna1P04756 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Chrna1P04756 Gm24749-201ENSMUST00000157838 343 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Mir5120-201ENSMUST00000175020 78 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.48□□□□□ -0.25
Chrna1P04756 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Gm37666-201ENSMUST00000194110 866 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Gm45433-201ENSMUST00000209386 247 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Gm19994-201ENSMUST00000217086 586 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Gm26035-201ENSMUST00000083065 308 ntBASIC13.48□□□□□ -0.25
Chrna1P04756 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Chrna1P04756 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chrna1P04756 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.48□□□□□ -0.25
Chrna1P04756 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.47□□□□□ -0.25
Chrna1P04756 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chrna1P04756 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna1P04756 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms