Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.26□□□□□ -0.61
CcnkO88874 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CcnkO88874 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CcnkO88874 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.25□□□□□ -0.61
CcnkO88874 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.25□□□□□ -0.61
CcnkO88874 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CcnkO88874 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.25□□□□□ -0.61
CcnkO88874 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.25□□□□□ -0.61
CcnkO88874 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.25□□□□□ -0.61
CcnkO88874 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
CcnkO88874 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
CcnkO88874 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.25□□□□□ -0.61
CcnkO88874 Gm12859-201ENSMUST00000117834 427 ntBASIC11.25□□□□□ -0.61
CcnkO88874 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
CcnkO88874 Mir7654-201ENSMUST00000185082 70 ntBASIC11.25□□□□□ -0.61
CcnkO88874 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.25□□□□□ -0.61
CcnkO88874 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.25□□□□□ -0.61
CcnkO88874 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
CcnkO88874 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.25□□□□□ -0.61
CcnkO88874 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.25□□□□□ -0.61
CcnkO88874 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CcnkO88874 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.25□□□□□ -0.61
CcnkO88874 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CcnkO88874 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.24□□□□□ -0.61
CcnkO88874 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
CcnkO88874 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CcnkO88874 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.24□□□□□ -0.61
CcnkO88874 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Mir6392-201ENSMUST00000184924 108 ntBASIC11.24□□□□□ -0.61
CcnkO88874 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Gm37917-201ENSMUST00000194711 392 ntBASIC11.24□□□□□ -0.61
CcnkO88874 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.24□□□□□ -0.61
CcnkO88874 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.24□□□□□ -0.61
CcnkO88874 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.24□□□□□ -0.61
CcnkO88874 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.24□□□□□ -0.61
CcnkO88874 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CcnkO88874 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CcnkO88874 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
CcnkO88874 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcnkO88874 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CcnkO88874 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.23□□□□□ -0.61
CcnkO88874 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.23□□□□□ -0.61
CcnkO88874 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms