Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh9F8VPK8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh9F8VPK8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh9F8VPK8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.9□□□□□ -0.35
Pcdh9F8VPK8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh9F8VPK8 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdh9F8VPK8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm24231-201ENSMUST00000104315 133 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm12363-201ENSMUST00000122250 668 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm5745-201ENSMUST00000183748 313 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm8227-201ENSMUST00000223306 571 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gm19163-201ENSMUST00000223313 780 ntBASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh9F8VPK8 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Gm27847-201ENSMUST00000183711 107 ntBASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Gm27375-201ENSMUST00000183799 107 ntBASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.88□□□□□ -0.35
Pcdh9F8VPK8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms