Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm17070-201ENSMUST00000170463 784 ntBASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm11942-201ENSMUST00000180255 345 ntBASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm19587-201ENSMUST00000191395 545 ntBASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm43912-201ENSMUST00000204352 538 ntBASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc188F6WEU2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Gm14942-201ENSMUST00000119642 336 ntBASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Gm3726-201ENSMUST00000203110 785 ntBASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc188F6WEU2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm24934-201ENSMUST00000103764 111 ntBASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.6□□□□□ -0.39
Ccdc188F6WEU2 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms