Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm14350-201ENSMUST00000116642 640 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Gm28043E0CXC2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Gm28043E0CXC2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.65□□□□□ -0.39
Gm28043E0CXC2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gm16372-201ENSMUST00000073088 450 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.64□□□□□ -0.39
Gm28043E0CXC2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Gm28043E0CXC2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm28043E0CXC2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms