Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Gm37905-201ENSMUST00000195310 341 ntBASIC11.29□□□□□ -0.6
Shank1D3YZU1 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.29□□□□□ -0.6
Shank1D3YZU1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Mir339-201ENSMUST00000083659 96 ntBASIC11.29□□□□□ -0.6
Shank1D3YZU1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Shank1D3YZU1 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm19994-201ENSMUST00000217086 586 ntBASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm45925-201ENSMUST00000218882 744 ntBASIC11.28□□□□□ -0.6
Shank1D3YZU1 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.28□□□□□ -0.6
Shank1D3YZU1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm15432-201ENSMUST00000121106 195 ntBASIC11.28□□□□□ -0.6
Shank1D3YZU1 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.28□□□□□ -0.6
Shank1D3YZU1 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Shank1D3YZU1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Gm14460-201ENSMUST00000121511 639 ntBASIC11.27□□□□□ -0.6
Shank1D3YZU1 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Gm7666-201ENSMUST00000146631 819 ntBASIC11.27□□□□□ -0.6
Shank1D3YZU1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Shank1D3YZU1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.27□□□□□ -0.61
Shank1D3YZU1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Shank1D3YZU1 Gm43916-201ENSMUST00000205062 967 ntBASIC11.27□□□□□ -0.61
Shank1D3YZU1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.27□□□□□ -0.61
Shank1D3YZU1 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms