Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Scn1aA2APX8 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Gm12997-201ENSMUST00000120207 640 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Gm25732-201ENSMUST00000175168 60 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.12□□□□□ -0.31
Scn1aA2APX8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Scn1aA2APX8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm11930-201ENSMUST00000117788 190 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm12380-201ENSMUST00000119012 544 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Mir7070-201ENSMUST00000183657 86 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm2260-201ENSMUST00000184965 657 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gm32999-201ENSMUST00000192693 562 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.11□□□□□ -0.31
Scn1aA2APX8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Scn1aA2APX8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm14028-201ENSMUST00000117434 479 ntBASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.1□□□□□ -0.31
Scn1aA2APX8 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.1□□□□□ -0.31
Scn1aA2APX8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms