Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm12341-201ENSMUST00000119724 503 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Mir7221-201ENSMUST00000184009 72 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm35960-201ENSMUST00000202712 767 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav6n-6A0A075B6B2 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm7558-201ENSMUST00000193221 1165 ntBASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm38223-201ENSMUST00000194484 695 ntBASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Gm45668-201ENSMUST00000211271 493 ntBASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav6n-6A0A075B6B2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms