Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Gm8213-201ENSMUST00000118191 441 ntBASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.36□□□□□ -0.59
H2afb3S4R1G7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Mir339-201ENSMUST00000083659 96 ntBASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Cog3-203ENSMUST00000227473 4197 ntBASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
H2afb3S4R1G7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm8805-201ENSMUST00000117848 313 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm37922-201ENSMUST00000195596 455 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm7287-201ENSMUST00000205267 602 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Matn2-203ENSMUST00000226766 3252 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.35□□□□□ -0.59
H2afb3S4R1G7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms