Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gm14723-201ENSMUST00000118686 215 ntBASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Gm27516-201ENSMUST00000184237 98 ntBASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Clcf1Q9QZM3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Clcf1Q9QZM3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm14704-201ENSMUST00000120300 874 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm24548-201ENSMUST00000158650 108 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm38266-201ENSMUST00000194931 421 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm3961-201ENSMUST00000204425 994 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm18935-201ENSMUST00000212692 664 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.45□□□□□ -0.58
Clcf1Q9QZM3 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Clcf1Q9QZM3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms