Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ube4bQ9ES00 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Gm13453-201ENSMUST00000118708 357 ntBASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Gm13616-201ENSMUST00000120600 222 ntBASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ube4bQ9ES00 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm17837-201ENSMUST00000186435 985 ntBASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm10766-202ENSMUST00000194123 606 ntBASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.1□□□□□ -0.47
Ube4bQ9ES00 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ube4bQ9ES00 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms