Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm15370-201ENSMUST00000117158 253 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm12241-201ENSMUST00000118330 726 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm38341-201ENSMUST00000195357 515 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm44364-201ENSMUST00000198368 141 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm4768-201ENSMUST00000206199 686 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm8227-201ENSMUST00000223306 571 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rtp4Q9ER80 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Rtp4Q9ER80 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rtp4Q9ER80 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Gm17208-201ENSMUST00000168388 535 ntBASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Gm2991-201ENSMUST00000173338 480 ntBASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Rtp4Q9ER80 Gm37042-201ENSMUST00000193816 581 ntBASIC11.82□□□□□ -0.52
Rtp4Q9ER80 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.82□□□□□ -0.52
Rtp4Q9ER80 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms