Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cfap53Q9D439 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Gm12384-201ENSMUST00000119228 919 ntBASIC13.85□□□□□ -0.19
Cfap53Q9D439 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.85□□□□□ -0.19
Cfap53Q9D439 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.85□□□□□ -0.19
Cfap53Q9D439 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cfap53Q9D439 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.84□□□□□ -0.19
Cfap53Q9D439 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Gm45784-201ENSMUST00000188360 142 ntBASIC13.84□□□□□ -0.19
Cfap53Q9D439 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.84□□□□□ -0.19
Cfap53Q9D439 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.84□□□□□ -0.19
Cfap53Q9D439 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cfap53Q9D439 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.83□□□□□ -0.19
Cfap53Q9D439 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.83□□□□□ -0.19
Cfap53Q9D439 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cfap53Q9D439 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Gm27731-201ENSMUST00000185192 107 ntBASIC13.83□□□□□ -0.2
Cfap53Q9D439 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cfap53Q9D439 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.83□□□□□ -0.2
Cfap53Q9D439 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms