Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.35□□□□□ -0.43
Trim16Q99PP9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim16Q99PP9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim16Q99PP9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.34□□□□□ -0.43
Trim16Q99PP9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm43433-201ENSMUST00000196573 481 ntBASIC12.34□□□□□ -0.43
Trim16Q99PP9 Gm5186-201ENSMUST00000218781 920 ntBASIC12.34□□□□□ -0.43
Trim16Q99PP9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.34□□□□□ -0.43
Trim16Q99PP9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim16Q99PP9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim16Q99PP9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim16Q99PP9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim16Q99PP9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim16Q99PP9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim16Q99PP9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim16Q99PP9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.33□□□□□ -0.44
Trim16Q99PP9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.33□□□□□ -0.44
Trim16Q99PP9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim16Q99PP9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim16Q99PP9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms