Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim8Q99PJ2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm15371-201ENSMUST00000117057 784 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm15429-201ENSMUST00000151268 798 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.36□□□□□ -0.43
Trim8Q99PJ2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim8Q99PJ2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Mir7654-201ENSMUST00000185082 70 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Gm28631-201ENSMUST00000190740 334 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Gm28693-202ENSMUST00000190758 331 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Gm19220-201ENSMUST00000222682 803 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim8Q99PJ2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms