Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm7150-201ENSMUST00000122032 981 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm26134-201ENSMUST00000178484 110 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm5805-201ENSMUST00000072779 456 ntBASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdh15Q99PJ1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh15Q99PJ1 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Pcdh15Q99PJ1 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Gm44647-201ENSMUST00000207402 428 ntBASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdh15Q99PJ1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm10169-201ENSMUST00000121822 348 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm17192-201ENSMUST00000169031 511 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Olfr584-201ENSMUST00000098210 964 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm15615-201ENSMUST00000118876 198 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm45113-201ENSMUST00000207518 165 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Gm45856-201ENSMUST00000212752 416 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Pcdh15Q99PJ1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdh15Q99PJ1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms