Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nck1Q99M51 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Nck1Q99M51 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12□□□□□ -0.49
Nck1Q99M51 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12□□□□□ -0.49
Nck1Q99M51 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.99□□□□□ -0.49
Nck1Q99M51 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Gm27390-201ENSMUST00000184516 176 ntBASIC11.99□□□□□ -0.49
Nck1Q99M51 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Gm6983-201ENSMUST00000214912 628 ntBASIC11.99□□□□□ -0.49
Nck1Q99M51 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.99□□□□□ -0.49
Nck1Q99M51 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.99□□□□□ -0.49
Nck1Q99M51 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.99□□□□□ -0.49
Nck1Q99M51 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Nck1Q99M51 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.98□□□□□ -0.49
Nck1Q99M51 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Gm5687-201ENSMUST00000118252 640 ntBASIC11.98□□□□□ -0.49
Nck1Q99M51 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Mir7684-201ENSMUST00000183858 60 ntBASIC11.98□□□□□ -0.49
Nck1Q99M51 Gm28693-202ENSMUST00000190758 331 ntBASIC11.98□□□□□ -0.49
Nck1Q99M51 Gm44397-201ENSMUST00000195950 113 ntBASIC11.98□□□□□ -0.49
Nck1Q99M51 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Nck1Q99M51 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nck1Q99M51 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nck1Q99M51 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nck1Q99M51 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms