Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Gm27331-201ENSMUST00000183705 60 ntBASIC12.21□□□□□ -0.45
Vmp1Q99KU0 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.21□□□□□ -0.45
Vmp1Q99KU0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.21□□□□□ -0.45
Vmp1Q99KU0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Vmp1Q99KU0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Vmp1Q99KU0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm13226-201ENSMUST00000117838 404 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Mir1982-201ENSMUST00000157368 74 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm45784-201ENSMUST00000188360 142 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm43818-201ENSMUST00000200605 466 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm45841-201ENSMUST00000207700 164 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Vmp1Q99KU0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm4271-201ENSMUST00000174444 973 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.19□□□□□ -0.46
Vmp1Q99KU0 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms