Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.17□□□□□ -0.46
Rab28Q99KL7 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.17□□□□□ -0.46
Rab28Q99KL7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Gm14760-201ENSMUST00000121831 999 ntBASIC12.17□□□□□ -0.46
Rab28Q99KL7 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.17□□□□□ -0.46
Rab28Q99KL7 Gm6007-201ENSMUST00000208170 823 ntBASIC12.17□□□□□ -0.46
Rab28Q99KL7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rab28Q99KL7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm26956-201ENSMUST00000182176 986 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm21769-201ENSMUST00000211922 111 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gm10076-201ENSMUST00000073238 384 ntBASIC12.16□□□□□ -0.46
Rab28Q99KL7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rab28Q99KL7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm14999-201ENSMUST00000121039 624 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm25043-201ENSMUST00000158604 212 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm43822-201ENSMUST00000200285 476 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm45865-201ENSMUST00000211815 945 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm5950-201ENSMUST00000213337 772 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm39404-201ENSMUST00000216350 313 ntBASIC12.15□□□□□ -0.46
Rab28Q99KL7 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Rab28Q99KL7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms