Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Cdk9Q99J95 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm7488-201ENSMUST00000117148 684 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm6447-201ENSMUST00000118905 835 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Cdk9Q99J95 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm26464-201ENSMUST00000157094 305 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm35960-201ENSMUST00000202712 767 ntBASIC12.71□□□□□ -0.37
Cdk9Q99J95 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cdk9Q99J95 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cdk9Q99J95 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm11524-201ENSMUST00000119349 807 ntBASIC12.7□□□□□ -0.38
Cdk9Q99J95 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm42550-201ENSMUST00000201553 960 ntBASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm19078-201ENSMUST00000206311 727 ntBASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cdk9Q99J95 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.7□□□□□ -0.38
Cdk9Q99J95 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cdk9Q99J95 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.7□□□□□ -0.38
Cdk9Q99J95 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms