Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm27572-201ENSMUST00000183702 255 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhga4Q91XY4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm17208-201ENSMUST00000168388 535 ntBASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhga4Q91XY4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdhga4Q91XY4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms