Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Gm13351-201ENSMUST00000118087 414 ntBASIC14.59□□□□□ -0.07
StrcQ8VIM6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Gm26134-201ENSMUST00000178484 110 ntBASIC14.59□□□□□ -0.07
StrcQ8VIM6 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
StrcQ8VIM6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
StrcQ8VIM6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
StrcQ8VIM6 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.58□□□□□ -0.07
StrcQ8VIM6 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
StrcQ8VIM6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
StrcQ8VIM6 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
StrcQ8VIM6 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
StrcQ8VIM6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm15615-201ENSMUST00000118876 198 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm5257-201ENSMUST00000121823 790 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm4034-201ENSMUST00000187674 480 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm5340-201ENSMUST00000203733 880 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm39288-201ENSMUST00000210554 446 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm45856-201ENSMUST00000212752 416 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 n-R5s185-201ENSMUST00000083953 119 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm18294-201ENSMUST00000176980 1748 ntBASIC14.58□□□□□ -0.08
StrcQ8VIM6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
StrcQ8VIM6 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm11619-201ENSMUST00000117474 237 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm8459-201ENSMUST00000162504 760 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm44647-201ENSMUST00000207402 428 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.57□□□□□ -0.08
StrcQ8VIM6 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
StrcQ8VIM6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
StrcQ8VIM6 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms