Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Gm38158-201ENSMUST00000194617 339 ntBASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rpap2Q8VC34 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gm9022-201ENSMUST00000182482 992 ntBASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gm44124-201ENSMUST00000204159 472 ntBASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.82□□□□□ -0.2
Rpap2Q8VC34 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm10434-201ENSMUST00000101158 471 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm12058-201ENSMUST00000118614 437 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm42627-201ENSMUST00000197347 224 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm18054-201ENSMUST00000207539 555 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.81□□□□□ -0.2
Rpap2Q8VC34 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpap2Q8VC34 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms