Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.71■□□□□ 0.43
Cd109Q8R422 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Gm12164-201ENSMUST00000121695 551 ntBASIC17.71■□□□□ 0.43
Cd109Q8R422 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Cd109Q8R422 Gm8285-201ENSMUST00000208293 759 ntBASIC17.71■□□□□ 0.43
Cd109Q8R422 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cd109Q8R422 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cd109Q8R422 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cd109Q8R422 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Cd109Q8R422 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC17.7■□□□□ 0.42
Cd109Q8R422 Rprl1-201ENSMUST00000158050 327 ntBASIC17.7■□□□□ 0.42
Cd109Q8R422 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Gm43184-201ENSMUST00000197247 542 ntBASIC17.7■□□□□ 0.42
Cd109Q8R422 Gm42682-201ENSMUST00000198349 1265 ntBASIC17.7■□□□□ 0.42
Cd109Q8R422 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cd109Q8R422 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Cd109Q8R422 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cd109Q8R422 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cd109Q8R422 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cd109Q8R422 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cd109Q8R422 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC17.69■□□□□ 0.42
Cd109Q8R422 Mir6546-201ENSMUST00000184460 62 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 Gm3332-201ENSMUST00000189337 928 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 Ighv4-2-201ENSMUST00000192975 362 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 Gm4607-201ENSMUST00000206649 577 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 AC125486.1-201ENSMUST00000218701 320 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 Gm807-202ENSMUST00000224929 408 ntBASIC17.69■□□□□ 0.42
Cd109Q8R422 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cd109Q8R422 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Cd109Q8R422 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cd109Q8R422 AC126262.1-201ENSMUST00000221802 1904 ntBASIC17.68■□□□□ 0.42
Cd109Q8R422 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC17.68■□□□□ 0.42
Cd109Q8R422 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC17.68■□□□□ 0.42
Cd109Q8R422 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Gm6781-201ENSMUST00000038304 1242 ntBASIC17.68■□□□□ 0.42
Cd109Q8R422 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cd109Q8R422 AC154262.2-202ENSMUST00000225158 1331 ntBASIC17.68■□□□□ 0.42
Cd109Q8R422 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cd109Q8R422 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC17.67■□□□□ 0.42
Cd109Q8R422 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cd109Q8R422 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC17.67■□□□□ 0.42
Cd109Q8R422 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd109Q8R422 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd109Q8R422 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd109Q8R422 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd109Q8R422 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cd109Q8R422 Gm26286-201ENSMUST00000104166 134 ntBASIC17.67■□□□□ 0.42
Cd109Q8R422 Gm8199-201ENSMUST00000121323 823 ntBASIC17.67■□□□□ 0.42
Cd109Q8R422 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC17.67■□□□□ 0.42
Cd109Q8R422 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms