Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm19184-201ENSMUST00000196798 928 ntBASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm5904-201ENSMUST00000210286 865 ntBASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm45930-201ENSMUST00000221330 292 ntBASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Atf7Q8R0S1 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm13315-201ENSMUST00000120376 991 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm11597-201ENSMUST00000121423 964 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Mir1982-201ENSMUST00000157368 74 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm24548-201ENSMUST00000158650 108 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm27514-201ENSMUST00000183692 110 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm43433-201ENSMUST00000196573 481 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Atf7Q8R0S1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Atf7Q8R0S1 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms